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Ticket #494 (closed defect: fixed)

Opened 2010-05-20T10:42:41-05:00

Last modified 2010-07-13T16:57:45-05:00

ImageJ importer plugin does not preserve pixel sizes

Reported by: melissa Owned by: curtis
Priority: major Milestone: bio-formats-4.2
Component: plugins Severity: major
Keywords: Cc:
Blocked By: Blocking:


Opening data/fv1000/glen/singlesimul.oib in ImageJ with the "Hyperstack" display option and "Autoscale" checked yields the following physical sizes:

Pixel Width: 1.0000
Pixel Height: 1.0000
Voxel Depth: 1.0000

The attached test class, when run on the same file, produces this output:

PhysicalSizeX = 0.621
PhysicalSizeY = 0.621
PhysicalSizeZ = 0.0

Attachments (628 bytes) - added by melissa 2010-05-20T10:43:10-05:00.

Change History

Changed 2010-05-20T10:43:10-05:00 by melissa

comment:1 Changed 2010-06-02T11:17:08-05:00 by curtis

  • Status changed from new to closed
  • Resolution set to fixed

Fixed in r6408.

comment:2 Changed 2010-07-09T12:55:02-05:00 by melissa

  • Milestone bio-formats-4.2 deleted

Milestone bio-formats-4.2 deleted

comment:3 Changed 2010-07-13T16:57:45-05:00 by melissa

  • Milestone set to bio-formats-4.2