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Ticket #329 (closed defect: fixed)

Opened 2008-11-19T12:57:27-06:00

Last modified 2008-11-26T08:05:48-06:00

Exception when saving from Image5D window

Reported by: melissa Owned by: melissa
Priority: major Milestone:
Component: plugins Severity: serious
Keywords: Cc:
Blocked By: Blocking:


Attempting to save some Image5D stacks using the Bio-Formats Exporter plugin results in the following exception:

java.lang.IllegalArgumentException: Invalid C size: 0
  at loci.formats.FormatTools.getZCTCoords(
  at loci.formats.out.OMETiffWriter.close(
  at loci.formats.out.TiffWriter.saveImage(
  at loci.formats.out.TiffWriter.saveImage(
  at loci.formats.out.OMETiffWriter.saveImage(
  at loci.formats.FormatWriter.saveImage(
  at ij.plugin.filter.PlugInFilterRunner.processOneImage(
  at ij.plugin.filter.PlugInFilterRunner.<init>(
  at ij.IJ.runUserPlugIn(
  at ij.IJ.runPlugIn(
  at ij.Executer.runCommand(

This can be reproduced by opening ome-tiff/curtis/multi-channel-4D-series.ome.tif.

Change History

comment:1 Changed 2008-11-24T20:18:47-06:00 by melissa

  • Status changed from new to closed
  • Resolution set to fixed

(In [4652]) Workaround for known bug in exporting from an Image5D window. Closes #329.

comment:2 Changed 2008-11-26T08:05:48-06:00 by melissa

Better fix in r4658.