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Ticket #380 (closed defect: fixed)

Opened 2009-04-23T14:56:44-05:00

Last modified 2009-04-28T12:18:05-05:00

Error converting some LEI files to OME-TIFF

Reported by: curtis Owned by: melissa
Priority: major Milestone:
Component: bio-formats Severity: serious
Keywords: Cc:
Blocked By: Blocking:

Description

$ bfconvert data/leica/simon/Leica\ demo/GFP-YFPcaax/GFP-YFPcaax.lei \
> -series 0 GFP-YFPcaax-series0.ome.tif
...
Exception in thread "main" java.lang.ArithmeticException: / by zero
        at loci.formats.out.OMETiffWriter.close(OMETiffWriter.java:105)
        at loci.formats.out.TiffWriter.saveImage(TiffWriter.java:165)
        at loci.formats.out.TiffWriter.saveImage(TiffWriter.java:186)
        at loci.formats.out.OMETiffWriter.saveImage(OMETiffWriter.java:157)
        at loci.formats.ImageWriter.saveImage(ImageWriter.java:195)
        at loci.formats.tools.ImageConverter.testConvert(ImageConverter.java:182)
        at loci.formats.tools.ImageConverter.main(ImageConverter.java:208)

Change History

comment:1 Changed 2009-04-28T12:18:05-05:00 by melissa

  • Status changed from new to closed
  • Resolution set to fixed

(In [5036]) Fix for reading/writing an OME-TIFF dataset that doesn't contain pixel data for every series. Closes #380.