⚠	NOTICE! This is a static HTML version of a legacy LOCI Software ticket. LOCI projects are now located on GitHub. The Bio-Formats project can be found here.

Ticket #507 (closed defect: fixed)

Opened 2010-06-09T00:25:29-05:00

Last modified 2010-06-22T17:10:26-05:00

Exception importing 16-bit indexed color data

Reported by:	curtis	Owned by:	curtis
Priority:	major	Milestone:	~~bio-formats-4.2.1~~
Component:	plugins	Severity:	serious
Keywords:		Cc:
Blocked By:		Blocking:

Description

E.g., with "index16&pixelType=uint16&indexed=true.fake":

java.lang.ArrayIndexOutOfBoundsException: -3201
	at loci.formats.ImageTools.indexedToRGB(ImageTools.java:554)
	at loci.formats.ChannelFiller.openBytes(ChannelFiller.java:186)
	at loci.formats.ChannelFiller.openBytes(ChannelFiller.java:150)
	at loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:180)
	at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:304)
	at loci.formats.DimensionSwapper.openBytes(DimensionSwapper.java:249)
	at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:304)
	at loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:260)
	at loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:252)
	at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:292)
	at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:292)
	at loci.plugins.util.ImageProcessorReader.openProcessors(ImageProcessorReader.java:107)
	at loci.plugins.in.ImagePlusReader.readSeries(ImagePlusReader.java:240)
	at loci.plugins.in.ImagePlusReader.readImages(ImagePlusReader.java:155)
	at loci.plugins.in.ImagePlusReader.openImagePlus(ImagePlusReader.java:110)
	at loci.plugins.in.Importer.readPixels(Importer.java:134)
	at loci.plugins.in.Importer.run(Importer.java:87)
	at loci.plugins.LociImporter.run(LociImporter.java:77)

Change History

comment:1 Changed 2010-06-22T17:10:26-05:00 by curtis

Status changed from new to closed
Resolution set to fixed

Fixed in r6556.