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Ticket #665 (closed defect: fixed)

Opened 2012-02-06T10:53:10-06:00

Last modified 2012-02-13T10:12:51-06:00

Provide Histogram tool for SLIM Plugin

Reported by: aivar Owned by: aivar
Priority: major Milestone:
Component: slim-plugin Severity: serious
Keywords: Cc:
Blocked By: Blocking:


An important tool for FLIM image analysis is having a Histogram tool that allows the user to manipulate the minimum/maximum LUT mapping values. This should also work with spectral channels, having the capability to assign one LUT min/max to all channels.

Research Histogram tools in TRI2/SPCImage/ImageJ.

Expand on existing SLIMPlugin Histogram panel.

Get this to work with IJ2.

Change History

comment:1 Changed 2012-02-06T10:55:28-06:00 by aivar

  • Status changed from new to assigned

Curtis's comment from 1/26/2012:

I agree that we should make this work with IJ2. We need a general-purpose histogram tool for IJ2. Once we have it, there is no reason you can't use it for SLIM Plugin wherever needed. If you work on this, let's discuss further how best to implement within IJ2.

comment:2 Changed 2012-02-06T14:14:33-06:00 by aivar

The Histogram tool in SLIMPlugin using IJ1 is working adequately for that release.

I'm not sure this will be a one-size-fits-all solution. For SLIM Plugin this is a tool that shows the histogram but the primary concerns are (a) to serve as a visual legend to look up the values for LUT colors and (b) to set the LUT ranges so the user can interactively analyze the distribution of values. It also has to be aware of channels and work with them. It's also live and shows the progress of the fit process.

comment:3 Changed 2012-02-06T14:16:16-06:00 by aivar

  • Component changed from build to slim-plugin

comment:4 Changed 2012-02-06T15:33:22-06:00 by aivar

  • Status changed from assigned to new

comment:5 Changed 2012-02-13T10:12:51-06:00 by aivar

  • Status changed from new to closed
  • Resolution set to fixed